Single-Cell Analysis with Python
A step-by-step guide to analysing scRNA-seq data using scanpy and the scverse ecosystem — from raw counts to biological insight.
Bulk RNA-seq Analysis with Python
End-to-end differential expression analysis, pathway enrichment, and visualisation using PyDESeq2 and related tools.
Machine Learning for Genomics
Apply supervised and unsupervised machine learning to genomic data using scikit-learn and PyTorch.